Shanlin Ke

Postdoc Research Fellow


Curriculum vitae



Channing Division of Network Medicine

Harvard Medical School

181 Longwood Ave, Boston, MA, USA



Publications


Gut feelings: Associations of emotions and emotion regulation with the gut microbiome in women.


Ke S.*, Guimond A.J.*, S.S. Tworoger, T. Huang, A.T. Chan, Y.Y. Liu, L.D. Kubzansky

Psychological Medicine, 1-10, 2023, https://doi.org/10.1017/S0033291723000612


Benchmarking omics-based prediction of asthma development in children


Wang X., Wang T., Schaub D.P., Chen C., Sun Z., Ke S., Hecker., Maaser-Hecker A., Zeleznik O.A., Zeleznik R., Litonjua A.A., DeMeo D.L., Lasky-Su J., Silverman E.K., Liu Y.Y., Weiss S.T.

Respiratory Research , 2023, https://respiratory-research.biomedcentral.com/articles/10.1186/s12931-023-02368-8


ABO genotype alters the gut microbiota by regulating GalNAc levels in pigs


H Yang, J Wu, X Huang, Y Zhou, Y Zhang, M Liu, Q Liu, S Ke, et al., C Chen, L Huang

Nature, vol. 606(7913), 2022, https://www.nature.com/articles/s41586-022-04769-z


Rejuvenating the human gut microbiome


Ke S, Weiss ST, Liu YY

Trends in Molecular Medicine, vol. 28, 2022, https://doi.org/10.1016/j.molmed.2022.05.005


Dissecting the Role of the Human Microbiome in COVID-19 via Metagenome-assembled Genomes


Ke S., Weiss ST, Liu Y.Y.

Nature Communications, 13(1):5235, 2022, https://www.nature.com/articles/s41467-022-32991-w


Analysis of Intestinal Mycobiota of Patients with Clostridioides difficile Infection among a Prospective Inpatient Cohort


Y Cao*, L Wang*, S Ke*, CP Kelly, NR Pollock, JA Villafuerte Gálvez, et al., Yang-Yu Liu, Xinhua Chen

Microbiology Spectrum, vol. 10(4), 2022, https://journals.asm.org/doi/full/10.1128/spectrum.01362-22


Integrating gut microbiome and host immune markers to understand the pathogenesis of Clostridioides difficile infection


S Ke, NR Pollock, XW Wang, X Chen, K Daugherty, Q Lin, H Xu, C Kelly, Y.Y Liu

Gut microbes, vol. 13(1), 2021, https://doi.org/10.1080/19490976.2021.1935186


Gut Microbiota Predicts Healthy Late-Life Aging in Male Mice


S Ke, SJ Mitchell, MR MacArthur, AE Kane, DA Sinclair, EM Venable, K Chadaideh, R Carmody, F Grodstein, J Mitchell, Y.Y Liu

Nutrients, vol. 13(13(9):3290), 2021, https://doi.org/10.3390/nu13093290


Fecal mycobiota combined with host immune factors distinguish Clostridioides difficile infection from asymptomatic carriage


Y Cao*, L Wang*, S Ke*, JAV Gálvez, NR Pollock, C Barrett, R Sprague, Y.Y Liu, X Chen

Gastroenterology, vol. 160(7), 2021, https://www.sciencedirect.com/science/article/abs/pii/S0016508521004753


Age-based dynamic changes of phylogenetic composition and interaction networks of health pig gut microbiome feeding in a uniformed condition


S Ke, S Fang, M He, X Huang, H Yang, B Yang, C Chen, L Huang

BMC veterinary research, vol. 15(1), 2019, https://doi.org/10.1186/s12917-019-1918-5

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